CellProfiler 2.0 Help
Moderators: klmadden, mbray, David Logan, Anne Carpenter
102 topics • Page 1 of 3 • 1, 2, 3
-
- Announcements
- Replies
- Views
- Last post
-
- User input for the next CP beta
by mbray » Fri Apr 23, 2010 2:27 pm - 0 Replies
- 109 Views
- Last post by mbray
Fri Apr 23, 2010 2:27 pm
- User input for the next CP beta
-
- CellProfiler 2.0 Beta: Windows 32-bit/64-bit installations
by mbray » Tue Apr 13, 2010 9:18 am - 2 Replies
- 134 Views
- Last post by LeeKamentsky
Fri Aug 20, 2010 7:31 am
- CellProfiler 2.0 Beta: Windows 32-bit/64-bit installations
-
- Beta release of CP 2.0
by mbray » Fri Apr 02, 2010 10:56 am - 0 Replies
- 147 Views
- Last post by mbray
Fri Apr 02, 2010 10:56 am
- Beta release of CP 2.0
-
- Alpha release of CP 2.0
by mbray » Sat Feb 27, 2010 5:27 pm - 0 Replies
- 170 Views
- Last post by mbray
Sat Feb 27, 2010 5:27 pm
- Alpha release of CP 2.0
-
- Topics
- Replies
- Views
- Last post
-
- CellProfiler 2.0 FAQ
by mbray » Wed Jan 20, 2010 10:00 am - 0 Replies
- 851 Views
- Last post by mbray
Wed Jan 20, 2010 10:00 am
- CellProfiler 2.0 FAQ
-
- Welcome
by LeeKamentsky » Fri Jul 10, 2009 9:02 am - 0 Replies
- 347 Views
- Last post by LeeKamentsky
Fri Jul 10, 2009 9:02 am
- Welcome
-
- Building on i386 Ubuntu Linux
by bwoodcroft » Wed Sep 01, 2010 5:34 am - 5 Replies
- 27 Views
- Last post by bwoodcroft
Mon Sep 06, 2010 8:24 pm
- Building on i386 Ubuntu Linux
-
- Landini's Color Deconvolution module
by amaidikio » Sun Aug 22, 2010 3:01 pm - 4 Replies
- 24 Views
- Last post by amaidikio
Mon Sep 06, 2010 11:30 am
- Landini's Color Deconvolution module
-
- Image Cytometry
by victor » Mon Sep 06, 2010 2:38 am - 0 Replies
- 6 Views
- Last post by victor
Mon Sep 06, 2010 2:38 am
- Image Cytometry
-
- Measure mutual information in a video stack
by jzman » Thu Sep 02, 2010 1:01 pm - 0 Replies
- 6 Views
- Last post by jzman
Thu Sep 02, 2010 1:01 pm
- Measure mutual information in a video stack
-
- Object intensity measurements with multiple image exposures
by derek » Fri Jun 25, 2010 1:10 pm - 2 Replies
- 42 Views
- Last post by Pete
Thu Sep 02, 2010 10:56 am
- Object intensity measurements with multiple image exposures
-
- OverlayOutlines
by MichaelW » Wed Sep 01, 2010 10:36 am - 3 Replies
- 16 Views
- Last post by mbray
Thu Sep 02, 2010 10:18 am
- OverlayOutlines
-
- "Set Interactively" threshold method in IdentifyPrimaryObj..
by rchereji » Fri Aug 27, 2010 11:46 pm - 2 Replies
- 20 Views
- Last post by rchereji
Wed Sep 01, 2010 8:28 am
- "Set Interactively" threshold method in IdentifyPrimaryObj..
-
- quantification of nuclear import of pDNA
by Annette » Tue Aug 31, 2010 4:20 am - 1 Replies
- 8 Views
- Last post by mbray
Tue Aug 31, 2010 11:03 am
- quantification of nuclear import of pDNA
-
- Per-cell stats without pre-segmentation
by bwoodcroft » Thu Aug 26, 2010 8:14 pm - 2 Replies
- 22 Views
- Last post by bwoodcroft
Tue Aug 31, 2010 3:38 am
- Per-cell stats without pre-segmentation
-
- suggestion for background subtraction
by tischer » Fri Aug 27, 2010 9:27 am - 2 Replies
- 15 Views
- Last post by mbray
Fri Aug 27, 2010 1:39 pm
- suggestion for background subtraction
-
- ImageMath ....
by tischer » Fri Aug 27, 2010 8:20 am - 1 Replies
- 11 Views
- Last post by mbray
Fri Aug 27, 2010 1:20 pm
- ImageMath ....
-
- how to make DNA ploidy analysis on Fleugen stained cells?
by mahmoud » Thu Jun 17, 2010 10:52 am - 12 Replies
- 99 Views
- Last post by mbray
Thu Aug 26, 2010 9:38 am
- how to make DNA ploidy analysis on Fleugen stained cells?
-
- Identifying/Measuring collagen fiblrils
by S Watson » Mon Aug 23, 2010 1:20 pm - 2 Replies
- 14 Views
- Last post by S Watson
Tue Aug 24, 2010 1:17 pm
- Identifying/Measuring collagen fiblrils
-
- Need Help detecting how Blue a colony is
by Alos » Fri Jun 04, 2010 8:38 am - 8 Replies
- 81 Views
- Last post by mbray
Sat Aug 21, 2010 6:29 am
- Need Help detecting how Blue a colony is
-
- how to handle flex files
by MarcKobudo » Tue Jun 22, 2010 10:26 am - 4 Replies
- 40 Views
- Last post by mbray
Sat Aug 21, 2010 6:27 am
- how to handle flex files
-
- Editobjectsmanually on image?
by Feel » Tue Jun 08, 2010 6:32 am - 9 Replies
- 90 Views
- Last post by mbray
Sat Aug 21, 2010 6:22 am
- Editobjectsmanually on image?
-
- Export to spreadsheet
by smegmail » Thu Jul 22, 2010 6:45 am - 3 Replies
- 44 Views
- Last post by mbray
Sat Aug 21, 2010 6:18 am
- Export to spreadsheet
-
- Identify Objects in Grid Error
by mbasciotta » Fri Apr 23, 2010 6:10 pm - 2 Replies
- 36 Views
- Last post by mbray
Fri Aug 20, 2010 10:51 am
- Identify Objects in Grid Error
-
- Crop with mouse not implemented?
by Jose » Tue Apr 20, 2010 10:49 am - 2 Replies
- 51 Views
- Last post by mbray
Fri Aug 20, 2010 10:40 am
- Crop with mouse not implemented?
-
- Problems related to identifying objects
by hanna » Fri Aug 06, 2010 8:30 am - 10 Replies
- 101 Views
- Last post by mbray
Fri Aug 20, 2010 10:34 am
- Problems related to identifying objects
-
- Problems opening ZVI-files
by aquamera » Tue Aug 10, 2010 4:04 am - 5 Replies
- 37 Views
- Last post by LeeKamentsky
Fri Aug 20, 2010 9:55 am
- Problems opening ZVI-files
-
- Identifying apical cell area in epithelial cells
by A Maartens » Fri Aug 13, 2010 9:41 am - 3 Replies
- 23 Views
- Last post by mbray
Tue Aug 17, 2010 2:10 pm
- Identifying apical cell area in epithelial cells
-
- brown fat analysis
by mfjackson » Thu Jul 29, 2010 4:59 pm - 7 Replies
- 46 Views
- Last post by mbray
Fri Aug 13, 2010 10:11 am
- brown fat analysis
-
- problem with ilastik package
by imgen » Tue Aug 10, 2010 7:38 am - 1 Replies
- 17 Views
- Last post by mbray
Thu Aug 12, 2010 8:27 am
- problem with ilastik package
-
- Display platemap module
by smegmail » Mon Aug 09, 2010 8:13 am - 1 Replies
- 30 Views
- Last post by afraser
Tue Aug 10, 2010 8:20 am
- Display platemap module
-
- Accessing z-stack number
by JohnK » Mon Aug 09, 2010 7:12 pm - 1 Replies
- 15 Views
- Last post by JohnK
Mon Aug 09, 2010 8:38 pm
- Accessing z-stack number
-
- What does the Analysis Mean?
by troenlab » Mon Aug 09, 2010 9:10 am - 4 Replies
- 37 Views
- Last post by troenlab
Mon Aug 09, 2010 3:53 pm
- What does the Analysis Mean?
-
- Identifying "halos" around objects
by alan17 » Tue Jul 20, 2010 3:32 pm - 2 Replies
- 46 Views
- Last post by alan17
Thu Aug 05, 2010 11:32 am
- Identifying "halos" around objects
-
- Measuring cell speed during migration???
by alexmuse » Thu Aug 05, 2010 6:13 am - 1 Replies
- 24 Views
- Last post by mbray
Thu Aug 05, 2010 9:19 am
- Measuring cell speed during migration???
-
- Measuring cell velocity (or speed) during migration
by alexmuse » Mon Jul 19, 2010 6:24 am - 1 Replies
- 57 Views
- Last post by mbray
Thu Aug 05, 2010 9:18 am
- Measuring cell velocity (or speed) during migration
-
- Trouble Segmenting Stem Cells
by c_cerv13 » Tue Jul 06, 2010 1:36 pm - 2 Replies
- 64 Views
- Last post by c_cerv13
Tue Aug 03, 2010 11:50 am
- Trouble Segmenting Stem Cells
-
- File Formats + memory
by BoZap » Mon Jul 19, 2010 1:36 pm - 4 Replies
- 81 Views
- Last post by mbray
Mon Aug 02, 2010 4:36 pm
- File Formats + memory
-
- CellProfiler2.0 Batch Job on Windows
by afolarin » Thu Jul 29, 2010 6:51 am - 2 Replies
- 39 Views
- Last post by afolarin
Mon Aug 02, 2010 8:26 am
- CellProfiler2.0 Batch Job on Windows
-
- How to: identify metaphase cells from brightfield images
by afolarin » Thu Jul 29, 2010 6:29 am - 2 Replies
- 25 Views
- Last post by afolarin
Mon Aug 02, 2010 8:21 am
- How to: identify metaphase cells from brightfield images
-
- Incell 2000
by dr20 » Fri Jul 30, 2010 12:20 am - 1 Replies
- 23 Views
- Last post by mbray
Fri Jul 30, 2010 9:09 am
- Incell 2000
-
- trouble identifying nuclear foci in 2.0
by afreund » Tue Jul 27, 2010 1:49 pm - 6 Replies
- 71 Views
- Last post by mbray
Thu Jul 29, 2010 4:55 pm
- trouble identifying nuclear foci in 2.0
-
- cell detection without nuclear dye..
by mridulkk » Fri Jul 09, 2010 12:53 pm - 8 Replies
- 107 Views
- Last post by mbray
Mon Jul 26, 2010 5:04 pm
- cell detection without nuclear dye..
-
- Error when integrating ImageJ module
by howellgj » Tue Jul 20, 2010 11:02 am - 3 Replies
- 43 Views
- Last post by mbray
Fri Jul 23, 2010 8:34 am
- Error when integrating ImageJ module
-
- Index Problem with MeasureObjectIntensity?!
by imgen » Tue Jul 06, 2010 9:53 am - 5 Replies
- 64 Views
- Last post by imgen
Wed Jul 14, 2010 7:22 am
- Index Problem with MeasureObjectIntensity?!
-
- Identify Primary and Intensity in Fluorescence Pictures
by kylesm » Thu Jul 08, 2010 10:30 am - 1 Replies
- 46 Views
- Last post by mbray
Fri Jul 09, 2010 11:00 am
- Identify Primary and Intensity in Fluorescence Pictures
-
- Calcium flux measurements
by calciumflux » Tue Jul 06, 2010 1:23 pm - 1 Replies
- 31 Views
- Last post by mbray
Fri Jul 09, 2010 10:23 am
- Calcium flux measurements
-
- hope there is a example pipeline for the neuron measurement
by K1735 » Tue Jul 06, 2010 1:16 am - 1 Replies
- 68 Views
- Last post by David Logan
Tue Jul 06, 2010 1:52 pm
- hope there is a example pipeline for the neuron measurement
-
- Grass epidermis cells
by dunnr » Wed Jun 30, 2010 4:37 pm - 1 Replies
- 40 Views
- Last post by mbray
Fri Jul 02, 2010 9:58 am
- Grass epidermis cells
-
- CellProfiler 2.0 Mac OS X installation
by salil » Tue Jun 22, 2010 11:37 am - 3 Replies
- 80 Views
- Last post by klmadden
Mon Jun 28, 2010 9:14 am
- CellProfiler 2.0 Mac OS X installation
-
- Trouble identifying yeast cells
by BioTurboNick » Mon Jun 21, 2010 2:49 pm - 4 Replies
- 109 Views
- Last post by klmadden
Mon Jun 28, 2010 9:11 am
- Trouble identifying yeast cells
-
- Using different versions of CellProfiler
by annalumma » Thu Jun 24, 2010 11:34 am - 4 Replies
- 37 Views
- Last post by mbray
Fri Jun 25, 2010 11:54 am
- Using different versions of CellProfiler
-
- Install Developers Cellprofiler on Win Xp 32bit
by Feel » Wed Jun 02, 2010 7:04 am - 1 Replies
- 46 Views
- Last post by mbray
Thu Jun 24, 2010 2:16 pm
- Install Developers Cellprofiler on Win Xp 32bit
-
- Relate module
by Steve » Tue Jun 22, 2010 3:51 pm - 2 Replies
- 40 Views
- Last post by Steve
Wed Jun 23, 2010 8:23 pm
- Relate module
102 topics • Page 1 of 3
• 1, 2, 3
Who is online
Users browsing this forum: No registered users and 1 guest
Forum permissions
You cannot post new topics in this forum
You cannot reply to topics in this forum
You cannot edit your posts in this forum
You cannot delete your posts in this forum
You cannot post attachments in this forum